CHAPTER 02 · 9 STUDY NOTES · RAYMON SU

Chemistry of life
One idea at a time.

Review atoms, bonds, water, pH, and the chemical properties that make living systems possible.

Part of the free Knowledge Mountain biology library. Read an explanation, try a question, and use a memory cue to check what you can recall.

The nucleus sets the identityCount the chargeThree bonds, three different jobsWater is a tiny uneven magnetWhy does a water strider stay up?A lake is a temperature bufferA frozen lake keeps life belowA small number change, a big chemical changeThe chemical shock absorber
Atoms · FIELD NOTE

The nucleus sets the identity

Protons are positive, neutrons have no charge, and electrons are negative. The number of protons identifies the element. Changing neutrons makes an isotope; gaining or losing electrons makes an ion.

Why it works

A carbon atom always has six protons. Carbon-12 and carbon-14 differ in neutron number. An atom that loses an electron becomes more positively charged.

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Atoms · RECALL QUESTION

Count the charge

Try it before you look

An atom has 11 protons and 10 electrons. What is its net charge?

Reveal answer

+1.

Why it works

Eleven positive charges and ten negative charges leave one extra positive charge. Neutrons do not affect the net electric charge.

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Chemical bonds · FIELD NOTE

Three bonds, three different jobs

Covalent bonds share electrons. Ionic attractions occur between oppositely charged ions. Hydrogen bonds are attractions involving a partly positive hydrogen and a nearby electronegative atom.

Why it works

Water molecules have strong covalent bonds within each molecule and hydrogen bonds between neighboring molecules. Do not call the attraction between two water molecules a covalent bond.

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Water · FIELD NOTE

Water is a tiny uneven magnet

Oxygen pulls shared electrons more strongly than hydrogen. This gives water a partly negative oxygen end and partly positive hydrogen ends. The molecule is polar even though its total charge is zero.

Why it works

Polarity lets water surround many ions and polar molecules. Nonpolar substances, such as oils, do not mix readily with water.

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Water · RECALL QUESTION

Why does a water strider stay up?

Try it before you look

Which water property helps a water strider stand on the surface, and what causes it?

Reveal answer

High surface tension, caused by cohesion between water molecules through hydrogen bonding.

Why it works

At the surface, water molecules are pulled toward neighboring water molecules. This creates a surface that resists being broken. Adhesion is water sticking to another kind of material.

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Water and temperature · FIELD NOTE

A lake is a temperature buffer

Water absorbs or releases a lot of heat while changing temperature relatively slowly. Evaporation cools a surface because faster-moving molecules leave it.

Why it works

Hydrogen bonds absorb energy as they break and release energy as they form. This helps moderate body temperature and climate. Sweat must evaporate to provide much of its cooling effect.

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Ice · RECALL QUESTION

A frozen lake keeps life below

Try it before you look

Why does ice float, and why can that help organisms survive winter?

Reveal answer

Ice is less dense than liquid water. Floating ice forms an insulating layer over liquid water below.

Why it works

Hydrogen bonding holds water molecules farther apart in ice. Most substances become denser as solids, so water’s behavior is unusual and biologically useful.

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pH · RECALL QUESTION

A small number change, a big chemical change

Try it before you look

A solution changes from pH 6 to pH 4. How does its hydrogen ion concentration change?

Reveal answer

It becomes 100 times greater.

Why it works

Each one-unit decrease in pH means ten times more H+ in the usual classroom model. Two units means 10 × 10 = 100. Lower pH means more acidic.

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Buffers · FIELD NOTE

The chemical shock absorber

A buffer reduces sudden pH changes by accepting H+ when too much is present or releasing H+ when too little is present. It does not make every solution neutral.

Why it works

Many proteins work only within a narrow pH range. Buffers help protect those conditions, but a buffer has a limited capacity and can be overwhelmed.

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